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Computational analysis of dimer G6PD structure to elucidate pathogenicity of G6PD variants

BioMedicine| Volume 14 Issue 1| March 2024

Shamini Chandran, Naveen Eugene Louis, Syazwani Itri Amran, Nurriza Ab Latif, Muaawia Ahmed Hamza, Mona Alonazi

2024

  • Nik Malek, N. A. N., Abdul Talib, C., Mohd Nor, N. S., Ibrohim, Matmin, J., Lee, S. L., & Noordin, M. K. (2024). Development of mobile app as an educational tool for understanding nanomedicine. Journal of Human Centered Technology, 3(1), 15–21. https://doi.org/10.11113/humentech.v3n1.63
  • Yunus, J., Wan Dagang, W. R. Z., Jamaluddin, H., & et al. (2024). Bacterial biofilm growth and perturbation by serine protease from Bacillus sp. Archives of Microbiology, 206, 138. https://doi.org/10.1007/s00203-024-03857-0
  • Vangetaraman, K., Asiri, A., Sivalingam, S., Shafi, A. A., Jemon, K., & Saidin, S. (2024). Morphology and wettability analyses on electrospun polyvinyl alcohol/elastin nanofibers at varying voltages and composition. In Advances in Science and Technology. 2023 7th International Conference on Nanomaterials and Biomaterials & 2023 5th Asia Conference on Material and Manufacturing Technology. Trans Tech Publications Ltd. https://doi.org/10.4028/p-arih8r
  • Boonyuen, U., Jacob, B. C., Wongwigkan, J., & et al. (2024). Genetic analysis and molecular basis of G6PD deficiency among malaria patients in Thailand: Implications for safe use of 8-aminoquinolines. Malaria Journal, 23, 38. https://doi.org/10.1186/s12936-024-04864-8
  • Louis, N. E., Hamza, M. A., Engku Baharuddin, P. N. S. D., Chandran, S., Latif, N. A., Alonazi, M. A., & Amran, S. I. (2024). Assessing the structural dynamics of the glucose-6-phosphate dehydrogenase dimer interface using molecular dynamics simulation and ligand screening using computer aided drug discovery. Molecular Simulation, 50(1), 63–74. https://doi.org/10.1080/08927022.2023.2274871
  • Chandran, S., Louis, N. E., Amran, S. I., Ab Latif, N., Hamza, M. A., & Alonazi, M. (2024). Computational analysis of dimer G6PD structure to elucidate pathogenicity of G6PD variants. Biomedicine (Taipei), 14(1), 47-59. https://doi.org/10.37796/2211-8039.1431
  • Liew, K. J., Shahar, S., Shamsir, M. S., & et al. (2024). Integrating multi-platform assembly to recover MAGs from hot spring biofilms: Insights into microbial diversity, biofilm formation, and carbohydrate degradation. Environmental Microbiome, 19, 29. https://doi.org/10.1186/s40793-024-00572-7
  • Usman, H. M., Kamaroddin, M. F. A., Sani, M. H., Malek, N. A. N. N., Omoregie, A. I., & Zainaf, A. (2024). Comparative analysis of growth dynamics between Chlorella sorokiniana and Chlorella vulgaris isolated from the local environment for biodiesel production. Bioresource Technology, 130868. https://doi.org/10.1016/j.biortech.2024.130868

2023

  • Abu Bakar, N. F. A. B., Yeo, Z. L., Hussin, F., Madhavan, P., Lim, V., Jemon, K., & Prabhakaran, P. (2023). Synergistic effects of combined cisplatin and Clinacanthus nutans extract on triple negative breast cancer cells. Journal of Taibah University Medical Sciences, 18(6), 1220-1236. https://doi.org/10.1016/j.jtumed.2023.04.003
  • Alahmmar, M., Prabhakaran, P., Jaganathan, S., & Malek, N. A. N. N. (2023). Fabrication and characterization of polycaprolactone with retinoic acid and cerium oxide for anticancer applications. Biointerface Research in Applied Chemistry, 13.
  • Abu Bakar, N. F. A. B., Yeo, Z. L., Hussin, F., Madhavan, P., Lim, V., Jemon, K., & Prabhakaran, P. (2023). Synergistic effects of combined cisplatin and Clinacanthus nutans extract on triple negative breast cancer cells. Journal of Taibah University Medical Sciences, 18(6), 1220-1236. https://doi.org/10.1016/j.jtumed.2023.04.003
  • Malek, N. A. N. N., Shamsuddin, M., Matmin, J., Jemon, K., Samad, A. A., Hassan, M. H. A., & Susanto, H. (2023). Antibacterial wound healing application of bio-inspired green silver nanoparticles: A review. Journal of Materials in Life Sciences (JOMALISC), 2(2), 147–153. https://doi.org/10.11113/jomalisc.v2.43
  • Khrisna, D. F., Jumat, M. A., Jemon, K., & Saidin, S. (2023). Antibacterial analysis on everolimus grafted biomaterial surfaces using polydopamine intermediate layer for potential use on medical devices. Journal of Human Centered Technology, 2(2), 11–18. https://doi.org/10.11113/humentech.v2n2.52
  • Hasham, R., Maniarasu, N., Jemon, K., Abd Latif, N., & Bahari, H. (2023). A review on rosmarinic acid rich extract for skin regeneration through rapamycin signaling pathway. Chemical and Natural Resources Engineering Journal (Formally Known As Biological and Natural Resources Engineering Journal), 7(1), 1–9. https://doi.org/10.31436/cnrej.v7i1.85
  • Alakbaree, M., Abdulqader, A., Abdulsalam, A. H., Hamza, M. A., Amran, S. I., Shamsir, M. S., & Ab Latif, N. (2024). G6PD deficiency: Exploring the relationship with different medical disorders. Journal of Contemporary Medical Sciences, 9(5).
  • Alakbaree, M., Abdulsalam, A. H., Ahmed, H. H., Ali, F. H., Al-Hili, A., Shamsir Omar, M. S., Alonazi, M., Jamalis, J., Ab Latif, N., Hamza, M. A., & Amran, S. I. (2023). A computational study of structural analysis of Class I human glucose-6-phosphate dehydrogenase (G6PD) variants: Elaborating the correlation to chronic non-spherocytic hemolytic anemia (CNSHA). Computational Biology and Chemistry, 104, 107873. https://doi.org/10.1016/j.compbiolchem.2023.107873
  • Mohd Ghazi, R., Nik Yusoff, N. R., Abdul Halim, N. S., Wahab, I. R. A., Ab Latif, N., Hasmoni, S. H., & Zakaria, Z. A. (2023). Health effects of herbicides and its current removal strategies. Bioengineered, 14(1). https://doi.org/10.1080/21655979.2023.2259526
  • Lazaldin, M. A. M., Lambuk, L., Ahmad, S., & Mohamud, R. (2023). Growth factors and their receptors: Multitasking functionality in health and disease. In H. M. Mansour, M. M. Khattab, & A. S. El-khatib (Eds.), Receptor Tyrosine Kinases in Neurodegenerative and Psychiatric Disorders (pp. 187-243). Academic Press.
  • Lazaldin, M. A. M., Iezhitsa, I., Agarwal, R., Agarwal, P., & Ismail, N. M. (2023). Neuroprotective effects of exogenous brain-derived neurotrophic factor on amyloid-beta 1–40-induced retinal degeneration. Neural Regeneration Research, 18(2), 382-388. https://doi.org/10.4103/1673-5374.346546
  • Chan, S. X. Y., Fitri, N., Mio Asni, N. S., Sayuti, N. H., Azlan, U. K., Qadi, W. S. M., Dawoud, E. A. D., Kamal, N., Sarian, M. N., & Mohd Lazaldin, M. A. (2023). A comprehensive review with future insights on the processing and safety of fermented fish and the associated changes. Foods, 12, 558. https://doi.org/10.3390/foods12030558
  • Peng, R., Li, D., Wang, J., et al. (2023). Reassortment and genomic analysis of a G9P[8]-E2 rotavirus isolated in China. Virology Journal, 20, 135. https://doi.org/10.1186/s12985-023-02064-5
  • Wong, C. Y., Tham, J. S., Foo, C. N., Ng, F. L., Shahar, S., Zahary, M. N., Ismail, M. N., Tan, C. S., Hoh, B. P., Kumar, S. V., & Lim, Y. M. (2023). Factors influencing COVID-19 vaccination intention among university students: A cross-sectional study in Malaysia. Biosafety and Health, 5, 37-44.
  • Peng, R., Li, D., Wang, J., et al. (2023). Isolation and genomic characterization of a reassortant G9P[8]-E2 rotavirus strain in China. Research Square. https://doi.org/10.21203/rs.3.rs-2563661/v1
  • Usman, M. H., Kamaroddin, M. F., Sani, M. H., & Nik Malek, N. A. N. (2023). Exploring the potential of microalgae-fungi co-cultivation for sustainable bioprocessing in microalgae biorefinery. Malaysian Applied Biology, 52(6), 23-46. https://doi.org/10.55230/mabjournal.v52i6.2783
  • Radzi, M. R. M., Lim, C. K., Sulaiman, N., & Jemon, K. (2023). Nanoparticles-based chemo-phototherapy synergistic effects for breast cancer treatment: A systematic review. Biointerface Research in Applied Chemistry, 13(3), 232. https://doi.org/10.33263/BRIAC133.232